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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917426.1_cds_XP_016467027.1_59817
CDS Infomation

[gene=LOC107789682] [db_xref=GeneID:107789682] [protein=histidine decarboxylase-like] [protein_id=XP_016467027.1] [location=complement(join(136812..137390,137490..137626,137733..137926,138378..138612,139371..139584,140065..140088))] [gbkey=CDS]
Sequence

ATGGGAAGCTTATCATTTGAAAAGGATTTTGAGCCATCGGTTGTAACTCCCAGAGGTTTA
ATAGCAAATGGAGATTTTGGAGAAATGAAAAGACTAAAGGTGGCAACACCAACTACACCA
AGGAAGAATTTGAATGTTGCAGTTACAGAGCCAGGGTCCAGAAATGATGGACCAAGTCTC
GACTGTATTTTGATGAATTATATTGACACACTTTCCCAACGTATCAACTATCATATAGGT
TATCCAGTGAATATATGCTATGAGCACTACGCTAGCTTAGCCCCACTTTTGCAATTCCAC
TTAAATAATTGTGGGGATCCATTTCTTCAAAACACTGTGGATTTCCATTCAAAAGATTTC
GAAGTGGCTGTTTTGAATTGGTTTGCAGACTTATGGGAAATTGAAAAAGATCAATATTGG
GGTTATGTTACAAATGGCGGCACTGAAGGAAATCTCCATGGCATTTTGGTGGGGAGAGAA
TTACTTCCAACTGGGATATTATATGCATCAAAAGACTCTCATTATTCGGTCGCCAAAGCT
GCAATGATGTACAGAATGGATTTTGAAATGATTAACACATCTGTACATGGAGAAATGGAT
TATTCAGATTTGAAAGCAAAATTACTTCAAAACAAGGGCAAACCAGCAATAATTAATGTT
ACAATTGGTACTACCTTCAAAGGAGCTGTTGATGATCTTGATATTATTCTTCAAACACTT
AAAGATTGTGGTTATACATATGATCAATTTTACATTCACTGTGATGCAGCACTCAATGGG
CTTATTATCCCTTTTATTAAAAATATGATTTCATTCAAGAAACCAATTGGAAGCGTCACA
ATTTCTGGTCACAAGTTCTTGGGATGTCCAATGCCTTGTGGAATTCAAATAACAAGGAAA
AGTTACATTAACAACCTCTCAAGAAAAGTTGAGTACATTGCTTCAGTAGATGCCACAATT
TCTGGAAGCAGAAATGGCTTAGCTCCAATCTTCTTGTGGTATAGTTTAAGTGCTAAAGGT
CAAATTGGGCTTCAAAAGGACGTTAAGAGATGCCTTGACAATGCTAAGTACTTAAAAGAT
CGTCTTCAACAAGCAGGTATCAGTGTCATGCTCAATGAGCTTAGTATCATAGTTGTCCTC
GAGAGACCTCGTGATCATGAATTTGTTCGTCGTTGGCAGCTTTCTTGTGTGAGAGATATG
GCACATGTTATTGTTATGCCGGGTATAACTAGAGATATCTTGGACAGTTTCATCAATGAT
TTATTGCAACAAAGGAAAAAATGGTACAAAGATGGAAATGTTACACCTCCTTGTGTTGCA
CAAGATATTGGTGCCCAAAATTGTGCTTGCTCTTACCACAAAATTGATTTCATTATCCCA
TAG

Peptide Sequence

PEP ID

XP_016467027.1
PEP Infomation

PREDICTED: histidine decarboxylase-like [Nicotiana tabacum]
Sequence

MGSLSFEKDFEPSVVTPRGLIANGDFGEMKRLKVATPTTPRKNLNVAVTEPGSRNDGPSL
DCILMNYIDTLSQRINYHIGYPVNICYEHYASLAPLLQFHLNNCGDPFLQNTVDFHSKDF
EVAVLNWFADLWEIEKDQYWGYVTNGGTEGNLHGILVGRELLPTGILYASKDSHYSVAKA
AMMYRMDFEMINTSVHGEMDYSDLKAKLLQNKGKPAIINVTIGTTFKGAVDDLDIILQTL
KDCGYTYDQFYIHCDAALNGLIIPFIKNMISFKKPIGSVTISGHKFLGCPMPCGIQITRK
SYINNLSRKVEYIASVDATISGSRNGLAPIFLWYSLSAKGQIGLQKDVKRCLDNAKYLKD
RLQQAGISVMLNELSIIVVLERPRDHEFVRRWQLSCVRDMAHVIVMPGITRDILDSFIND
LLQQRKKWYKDGNVTPPCVAQDIGAQNCACSYHKIDFIIP

Transcript Sequence

Gene sequence data has not been registered.